Package: beadarray
Title: Quality assessment and low-level analysis for Illumina BeadArray
        data
Version: 2.10.0
Date: 2013-03-15
Author: Mark Dunning, Mike Smith, Jonathan Cairns, Andy Lynch, Matt Ritchie
Maintainer: Mark Dunning <Mark.Dunning@cruk.cam.ac.uk>
Description: The package is able to read bead-level data (raw TIFFs and text files) output by BeadScan as well as bead-summary data from BeadStudio.  Methods for quality assessment and low-level analysis are provided.
Depends: R (>= 2.13.0), BiocGenerics (>= 0.3.2), Biobase (>= 2.17.8),
        methods, ggplot2
Imports: BeadDataPackR, limma, AnnotationDbi, stats4, BiocGenerics,
        reshape2
Suggests: lumi, vsn, affy, hwriter, beadarrayExampleData,
        illuminaHumanv3.db, gridExtra
License: GPL-2
biocViews: Microarray, OneChannel, QualityControl, Preprocessing
LazyData: yes
Packaged: 2013-04-04 10:04:50 UTC; biocbuild
Built: R 3.0.0; i386-w64-mingw32; 2013-04-04 16:40:43 UTC; windows
Archs: i386, x64
