Package: ChIPXpress
Type: Package
Title: ChIPXpress: enhanced transcription factor target gene
        identification from ChIP-seq and ChIP-chip data using publicly
        available gene expression profiles
Version: 1.2.0
Date: 2012-07-31
Author: George Wu
Maintainer: George Wu <gewu@jhsph.edu>
Description: ChIPXpress takes as input predicted TF bound genes from ChIPx data and uses a corresponding database of gene expression profiles downloaded from NCBI GEO to rank the TF bound targets in order of which gene is most likely to be functional TF target.
License: GPL(>=2)
LazyLoad: yes
Imports: Biobase, GEOquery, frma, affy, bigmemory, biganalytics
Depends: R (>= 2.10), ChIPXpressData
Suggests: mouse4302frmavecs, mouse4302.db, mouse4302cdf, RUnit,
        BiocGenerics
biocViews: ChIPchip, ChIPseq, Bioinformatics
Packaged: 2013-04-04 08:53:06 UTC; biocbuild
