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hapmapsnp6, RColorBrewer, genefilter, RSQLite, foreach, RUnit, pd.mapping50k.hind240, SNPchip (>= 2.5.7), doSNOW Enhances: DNAcopy, crlmm (>= 1.17.14) License: LGPL-2 MD5sum: b9330c37bbf8c54209cf88e650d29f47 NeedsCompilation: no Package: VariantAnnotation Version: 1.8.13 Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.7.7), GenomicRanges (>= 1.13.51), Rsamtools (>= 1.13.47), IRanges (>= 1.19.36), XVector Imports: methods, BiocGenerics, IRanges, XVector, Biostrings (>= 2.29.2), Biobase, Rsamtools, AnnotationDbi (>= 1.17.11), zlibbioc, BSgenome, GenomicFeatures (>= 1.13.11), DBI, utils, rtracklayer LinkingTo: IRanges, XVector, Biostrings, Rsamtools Suggests: RUnit, BSgenome.Hsapiens.UCSC.hg19, TxDb.Hsapiens.UCSC.hg19.knownGene, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20101109, SIFT.Hsapiens.dbSNP132, PolyPhen.Hsapiens.dbSNP131, snpStats, ggplot2, BiocStyle License: Artistic-2.0 MD5sum: 1ace1dd814089bea7c7d3a54dd437061 NeedsCompilation: no Package: vbmp Version: 1.30.0 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gtools, MergeMaid, methods, stats, utils, mvtnorm Suggests: siggenes, genefilter, MASS, RColorBrewer, GeneMeta, RUnit Enhances: coda License: LGPL-2 MD5sum: 27b967fdba1724fd4d0c735e2d9fbe7d NeedsCompilation: no Package: xmapbridge Version: 1.20.0 Depends: R (>= 2.0), methods Suggests: RUnit, RColorBrewer License: LGPL-3 MD5sum: 4bbdde649b716a8dcdef3d191596db69 NeedsCompilation: no Package: xps Version: 1.22.2 Depends: R (>= 2.6.0), methods, utils Suggests: tools License: GPL (>= 2.0) MD5sum: c2203b9160609c67fb91d47efcb83d69 NeedsCompilation: no Package: XVector Version: 0.2.0 Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.7.2), IRanges (>= 1.19.36) Imports: methods, BiocGenerics, IRanges LinkingTo: IRanges Suggests: Biostrings, drosophila2probe, RUnit License: Artistic-2.0 MD5sum: f0780f5d248f62e023adb283280d990b NeedsCompilation: no Package: yaqcaffy Version: 1.22.0 Depends: simpleaffy (>= 2.19.3), methods Imports: stats4 Suggests: MAQCsubsetAFX, affydata, xtable, tcltk2, tcltk 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