Package: MinimumDistance
Type: Package
Title: A package for de novo CNV detection in case-parent trios
Version: 1.6.0
Date: 03/13/2013
Author: Robert B Scharpf and Ingo Ruczinski
Maintainer: Robert B Scharpf <rscharpf@jhsph.edu>
Description: Analysis of de novo copy number variants in trios from high-dimensional genotyping platforms
License: Artistic-2.0
Depends: R (>= 2.14), BiocGenerics (>= 0.3.2), IRanges (>= 1.13.30)
Imports: methods, DNAcopy, utils, msm, lattice, BiocGenerics,
        VanillaICE (>= 1.21.24), ff, Biobase (>= 2.17.8), foreach,
        oligoClasses (>= 1.21.12), GenomicRanges, matrixStats
Suggests: human610quadv1bCrlmm (>= 1.0.3), SNPchip, RUnit
Enhances: snow, doSNOW
Collate: AllGenerics.R AllClasses.R methods-AnnotatedDataFrame.R
        methods-AssayData.R methods-Pedigree.R methods-TrioSet.R
        methods-TrioSetList.R methods-matrix.R methods-list.R
        methods-RangedData.R methods-ff_array.R segment2-methods.R
        mad-methods.R lattice-methods.R functions.R generator-funs.R
        utils.R zzz.R
LazyLoad: yes
biocViews: Microarray, SNP, Bioinformatics, CopyNumberVariants
Packaged: 2013-10-15 08:01:41 UTC; biocbuild
Built: R 3.0.2; ; 2013-10-15 15:36:07 UTC; windows
