63c063d67ccfdde6da197832c2ea1353 *DESCRIPTION
b5d4f662e10c4388d0b62d9af4605b0d *INDEX
bde6844f57592872cfe6d245be9976fb *Meta/Rd.rds
99832da5012ac82e1287bbe18bab55c9 *Meta/hsearch.rds
247b7fb918fbfbaa1ee7ec11ef64a7fb *Meta/links.rds
7111d71b537cbc73446f045cb071197c *Meta/nsInfo.rds
0cc8ff356f026ce9cec0601eea30e601 *Meta/package.rds
2da88668dcfa982ee5018b1b81036e53 *Meta/vignette.rds
dc285cba3010b80146424fe1e0b879d5 *NAMESPACE
32985105a22f93da404dfa47e9388e98 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/VariantAnnotation
e6529ec6c970534035ba9632d1ceceee *R/VariantAnnotation.rdb
bd3fa7bf0e0307c31fe0d6746ba75adf *R/VariantAnnotation.rdx
06340c5742b1959527a7f303bc2e1586 *doc/VariantAnnotation.R
29b28bf09a92fbb562c84bef2675c490 *doc/VariantAnnotation.Rnw
70291140f87a098355002fce3ca4e749 *doc/VariantAnnotation.pdf
c465e58e0ff84f6a2817c7669a95d69b *doc/filterVcf.R
03afeddc60c45b8fe3ca909e418bdfa6 *doc/filterVcf.Rnw
091a35ba1c71e98e1dac87d5830ac7fa *doc/filterVcf.bib
80d36012032d11d75ef4601e52919ef4 *doc/filterVcf.pdf
c520dd8532ceb5157ee2216b516f9833 *doc/index.html
be4950fb484e1070402e189e254b1a92 *extdata/chr22.vcf.gz
c303d8a0cc7e6314b5f42348221b0d3b *extdata/chr22.vcf.gz.tbi
bdf749a74d8752f306f71de5570d0ac6 *extdata/chr7-sub.vcf.gz
feabd526fafc1859be563e17b1c94773 *extdata/chr7-sub.vcf.gz.tbi
00213792673cddfaf7ac9606dc226f14 *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
f2a805083bd71e155f977ffb49df2cd5 *extdata/h1187-10k.vcf.gz
fab30e49f0d054d462f8e1737844b204 *extdata/h1187-10k.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
70772d13475d523489b3ba43a8fc6ec8 *help/AnIndex
cb3ef36ec2e64a574f5fb5eb7f79f489 *help/VariantAnnotation.rdb
d67c4d8f91d33512b3567c7ba8051f91 *help/VariantAnnotation.rdx
61336b2ed424d60d803c4a49b625de4b *help/aliases.rds
d5df2ac65d7a867e1660f4924bf4cab2 *help/paths.rds
d38c4763697760599b1ee8535e7825f8 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
3c6fb57b3d229c16b93f112390ca98e9 *libs/i386/VariantAnnotation.dll
7e60964c532f9342e81f2d376152b233 *libs/x64/VariantAnnotation.dll
3fbdc9b7c1dd5431b6ba0d76c9bd4a67 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
6e6064d7c429a35bc80235a253eed6f3 *unitTests/cases/VarScan_header.vcf
1e72c29c93e39910d59e569aad8db3db *unitTests/cases/expand.vcf
b94fb85e5ef300d87ab437d75f899b5a *unitTests/cases/fewer-FORMAT-than-GENO.vcf
3e81314c823a90ca24120330c546e7b0 *unitTests/cases/missing-FORMAT-metadata-elt.vcf
ba4c3b28d5f63740fda11e70a19eccd7 *unitTests/cases/mixedStructural.vcf
752d9d47c17d8f66791ce8804d88dbf6 *unitTests/cases/negative_FORMAT_Number.vcf
39d8ae8aa155e4bac07e9215017143e7 *unitTests/cases/no_FORMAT_column.vcf
4be0f539f13136116e1df4292adeb571 *unitTests/cases/no_GENO_row.vcf
a99d3b281abdd928c30fd147de3848a0 *unitTests/cases/no_INFO_header.vcf
0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
c22d2996cd80b61feedb2aa4c3caec23 *unitTests/test_SIFTandPolyPhen.R
aa01c6d20520f4516cc76f11b1041b64 *unitTests/test_ScanVcfParam-class.R
5b60f4aa72808e32f11784c96e3bf0c2 *unitTests/test_VCF-class.R
9c5c79827dca77e3fe81a8030b2fb4a4 *unitTests/test_VRanges-class.R
f4591255b3d620987342a4b17d09cc2a *unitTests/test_expand-methods.R
2fcea1933cb2a3e2328b75683fd265e2 *unitTests/test_filterVcf.R
d51b86a264c89d287ab21d6195e94215 *unitTests/test_genotypeToSnpMatrix.R
af78c1778099911a4b70b1b1d9431e2d *unitTests/test_locateVariants-methods.R
69a0f9520ea9fa8b95cce2a694c6647f *unitTests/test_predictCoding-methods.R
8d4d6b3c3460125772d3df70d194f363 *unitTests/test_readVcf-methods.R
c76b769a616956969112af0caa7bda2a *unitTests/test_scanVcf.R
e45debe5cc9e5a797032c5ece476a74c *unitTests/test_snpSummary.R
2c1e20a06ce85cb2c363d019d0e21b5f *unitTests/test_summarizeVariants-methods.R
c9f8fad4c1a446f84ab814377b00154f *unitTests/test_writeVcf-methods.R
