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PWMEnrich.Mmusculus.background Version: 4.0.1 Depends: R (>= 2.10), methods, PWMEnrich License: GPL-3 Package: RforProteomics Version: 1.4.1 Depends: MSnbase Imports: R.utils, Biobase, rpx, biocViews, BiocInstaller, interactiveDisplay, shiny Suggests: mzR, xcms, msdata, isobar, MALDIquant (>= 1.11), MALDIquantForeign, readBrukerFlexData, rTANDEM, synapter, synapterdata, IPPD, Rdisop, OrgMassSpecR, BRAIN, rols, hpar, GO.db, org.Hs.eg.db, biomaRt, RColorBrewer, ggplot2, reshape2, xtable, lattice, mzID, pRoloc, pRolocdata, knitr, BiocStyle, MSGFplus, MSGFgui, MSnID Enhances: cleaver License: Artistic-2.0 Package: rheumaticConditionWOLLBOLD Version: 1.3.1 Depends: R (>= 2.10.0) Suggests: genefilter, Biobase, hgu133plus2.db License: Artistic-2.0 Package: RIPSeekerData Version: 1.1.1 Depends: RIPSeeker License: GPL-2 Package: RMassBankData Version: 1.3.1 Suggests: RMassBank License: Artistic-2.0 Package: RNAinteractMAPK Version: 1.3.1 Depends: R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract Imports: grid, gdata, MASS, genefilter Suggests: qvalue, lattice License: Artistic-2.0 Package: RNAseqData.HNRNPC.bam.chr14 Version: 0.3.2 Suggests: GenomicAlignments, BiocInstaller License: LGPL Package: RnaSeqTutorial Version: 0.3.1 Depends: R (>= 3.0.2), methods, easyRNASeq Suggests: Rsamtools, ShortRead, BSgenome.Dmelanogaster.UCSC.dm3, GenomicAlignments, biomaRt, genomeIntervals License: Artistic-2.0 Package: RRBSdata Version: 1.0.0 Depends: R (>= 3.1.0), BiSeq License: LGPL-3 Package: rRDPData Version: 1.0.0 Depends: rRDP License: GPL-2 Package: RUVnormalizeData Version: 1.0.0 Depends: R (>= 2.10.0), Biobase License: GPL-3 Package: seqc Version: 1.0.0 Depends: R (>= 2.10) License: GPL-3 Package: seqCNA.annot Version: 1.1.1 Depends: R (>= 2.10) License: GPL-3 Package: serumStimulation Version: 1.1.1 Depends: R (>= 2.10) License: GPL (>= 2) Package: seventyGeneData Version: 1.1.1 Depends: R (>= 2.13.0) Suggests: Biobase, gdata, limma, breastCancerNKI License: Artistic-2.0 Package: shinyMethylData Version: 1.0.0 Depends: R (>= 3.0.0) License: Artistic-2.0 Package: simpIntLists Version: 1.1.1 License: GPL (>= 2) Package: SNAData Version: 1.11.1 Depends: R (>= 2.4.0), graph Suggests: Rgraphviz License: LGPL Package: SNAGEEdata Version: 1.1.1 Depends: R (>= 2.6.0) Suggests: ALL, hgu95av2.db, SNAGEE License: Artistic-2.0 Package: SomatiCAData Version: 1.3.1 Depends: R (>= 2.14) License: Artistic-2.0 Package: SomaticCancerAlterations Version: 1.1.1 Depends: R (>= 3.0.0) Imports: GenomicRanges, exomeCopy, stringr, IRanges Suggests: testthat, ggbio, ggplot2, BiocStyle, knitr License: GPL-3 Package: SpikeIn Version: 1.7.1 Depends: R (>= 1.6), affy (>= 1.23.4) License: Artistic-2.0 Package: SpikeInSubset Version: 1.5.1 Depends: R (>= 2.4.0), Biobase (>= 2.5.5), affy (>= 1.23.4) License: LGPL Package: stemHypoxia Version: 1.1.1 Depends: R (>= 2.14.1) License: GPL (>= 2) Package: stjudem Version: 1.5.1 Depends: R (>= 2.10), utils License: LGPL (>= 2) Package: synapterdata Version: 1.3.2 Depends: R (>= 2.10), synapter (>= 0.99.6) License: GPL-2 Package: TargetScoreData Version: 1.1.1 Suggests: TargetScore, gplots License: GPL-2 Package: TargetSearchData Version: 1.3.1 Depends: TargetSearch License: GPL (>= 2) Package: TBX20BamSubset Version: 1.1.1 Depends: Rsamtools (>= 1.9.8) Imports: xtable License: LGPL Package: TCGAcrcmiRNA Version: 1.0.0 Depends: R (>= 3.0), Biobase License: GPL-2 Package: TCGAcrcmRNA Version: 1.0.0 Depends: R (>= 3.0), Biobase License: GPL-2 Package: TCGAMethylation450k Version: 1.1.1 License: GPL-2 Package: tinesath1cdf Version: 1.3.1 License: Artistic-2.0 Package: tinesath1probe Version: 1.3.1 Depends: R (>= 1.6), AnnotationDbi (>= 1.11.9) License: LGPL Package: tweeDEseqCountData Version: 1.3.1 Depends: Biobase, R (>= 2.10) License: GPL (>= 2) Package: waveTilingData Version: 1.1.1 Depends: R (>= 2.14.0) License: GPL (>= 2) Package: XhybCasneuf Version: 1.3.1 Depends: R (>= 2.4.0), affy , ath1121501cdf , tinesath1cdf , RColorBrewer , methods, grid License: Artistic-2.0 Package: yeastCC Version: 1.5.1 Depends: Biobase (>= 2.5.5) License: Artistic-2.0 Package: yeastExpData Version: 0.11.1 Depends: R (>= 2.4), graph (>= 1.9.26) Suggests: Biobase, GO.db, RBGL, org.Sc.sgd.db License: GPL Package: yeastGSData Version: 0.3.1 License: Artistic-2.0 Package: yeastNagalakshmi Version: 1.1.1 License: Artistic-2.0 Package: yeastRNASeq Version: 0.3.1 Depends: R (>= 2.4) Suggests: Biobase, ShortRead, IRanges License: GPL Package: yri1kgv Version: 0.7.1 Depends: GGBase Imports: Biobase License: Artistic-2.0 Package: zebrafishRNASeq Version: 1.0.0 Depends: R (>= 2.10) Suggests: BiocStyle, knitr License: GPL