Package: annotation
Version: 0.99.95638
Depends: R (>= 3.1.0)
Imports: TxDb.Mmusculus.UCSC.mm10.ensGene, ensemblVEP, org.Hs.eg.db,
        parathyroidSE, GO.db, hgu95av2.db,
        TxDb.Hsapiens.UCSC.hg19.knownGene, Homo.sapiens, AnnotationHub,
        biomaRt, BSgenome.Hsapiens.UCSC.hg19,
        TxDb.Athaliana.BioMart.plantsmart22
License: Artistic-2.0

Package: arrays
Version: 0.1
Depends: R (>= 3.0.0)
Suggests: affy, limma, hgfocuscdf
License: Artistic-2.0

Package: eQTL
Version: 0.99.96137
Depends: R (>= 3.1.0)
Imports: snpStats, scatterplot3d, GGtools, yri1kgv, lumiHumanAll.db,
        lumi, foreach, doParallel, parallel, biglm, rmeta
License: Artistic-2.0

Package: generegulation
Version: 0.99.96013
Depends: R (>= 3.1.0)
Imports: MotifDb, S4Vectors, seqLogo, motifStack, Biostrings,
        GenomicFeatures, org.Sc.sgd.db,
        BSgenome.Scerevisiae.UCSC.sacCer3,
        TxDb.Scerevisiae.UCSC.sacCer3.sgdGene
License: Artistic-2.0

Package: rnaseqGene
Version: 0.99.101310
Depends: R (>= 3.1.0)
Imports: BiocStyle, knitr, airway, Rsamtools, GenomicFeatures,
        GenomicAlignments, DESeq2, gplots, RColorBrewer, PoiClaClu,
        ggplot2, genefilter, AnnotationDbi, org.Hs.eg.db, Gviz, sva,
        fission
License: Artistic-2.0

Package: variants
Version: 0.99.94455
Depends: R (>= 3.1.0)
Imports: VariantAnnotation, cgdv17, org.Hs.eg.db,
        TxDb.Hsapiens.UCSC.hg19.knownGene, BSgenome.Hsapiens.UCSC.hg19,
        PolyPhen.Hsapiens.dbSNP131
License: Artistic-2.0