plotLLSurface {BioNet} | R Documentation

## Log likelihood surface plot

### Description

The function plots the log likelihood surface for all a and lambda parameter of the beta-uniform mixture model.

### Usage

    plotLLSurface(x, opt=NULL, main="Log-Likelihood Surface", color.palette = heat.colors, nlevels = 32)

### Arguments

`x` | Numeric vector of p-values.
`opt` | List of optimal parameters for a and lambda from the beta-uniform mixture model.
`main` | The overall title of the plot.
`color.palette` | Color scheme of the image plot.
`nlevels` | Number of color levels.

### Author(s)

Marcus Dittrich

### Examples

    library(DLBCL)
    data(dataLym)
    pvals <- dataLym$t.pval
    names(pvals) <- dataLym$label
    mle <- fitBumModel(pvals, plot=FALSE)
    plotLLSurface(x=pvals, opt=mle)

[Package BioNet version 1.46.0 Index]