RscoreTrack {BubbleTree} | R Documentation

## RscoreTrack

### Description

get the RScore track

### Usage

    RscoreTrack(.Object, result.dat, gr2, cnv.gr = NULL, min.prev = 0.15,
      ymax = 3, cex = 1.5)

    ## S4 method for signature 'TrackPlotter'
    RscoreTrack(.Object, result.dat, gr2, cnv.gr = NULL,
      min.prev = 0.15, ymax = 3, cex = 1.5)

### Arguments

`.Object` | the object
`result.dat` | the results
`gr2` | the gr2 object
`cnv.gr` | cnv annotation
`min.prev` | previous min
`ymax` | max y
`cex` | the cex

### Value

the highlighted RScore track

### Examples

    load(system.file("data", "allCall.lst.RData", package="BubbleTree"))
    load(system.file("data", "centromere.dat.rda", package="BubbleTree"))
    load(system.file("data", "allCNV.lst.RData", package="BubbleTree"))
    load(system.file("data", "hg19.seqinfo.rda", package="BubbleTree"))

    gr2 = centromere.dat
    trackplotter <- new("TrackPlotter")
    nn <- "sam2"
    z <- RscoreTrack(trackplotter, allCall.lst[[nn]]@result, gr2, allCNV.lst[[nn]])

[Package BubbleTree version 2.16.0 Index]