joinAreas {CONFESS} | R Documentation

## joinAreas

### Description

It estimates the spot area by joining the red and green bright spot location estimates.

### Usage

    joinAreas(areaR, areaG, center, chaImg, areaBased, warning)

### Arguments

`areaR` | Data matrix. The bright (spot) coordinates in one channel.
`areaG` | Data matrix. The bright (spot) coordinates in the other channel.
`center` | Data matrix. The 2-dimensional location of the spot's center.
`areaBased` | Integer. Defines a rectangular pseudo-spot size whose fluorescence will be estimated.
`warning` | Character string. An indicator of the estimation type that has been internally performed, i.e. fluorescence-based or BF image modelling.
`chaImgs` | Data matrix. The channel binary segmented image data that are used for reference to obtain the area of interest.

### Value

The coordinates of the spot area and its length in pixels.

[Package CONFESS version 1.14.0 Index]