htx_app {HumanTranscriptomeCompendium} | R Documentation

## explore SRA metadata

### Description

explore SRA metadata

### Usage

    htx_app()

### Value

a SummarizedExperiment can be requested through an event

### Note

This function deals with extraction of compendium elements. The overall scope is determined by HumanTranscriptomeCompendium::studTable which is the list of all studies with taxon 9606, strategy RNA-seq, source transcriptomic. Some studies will not have experiments in the compendium, and if such are selected, a warning will be generated in the session.

### Examples

    if (interactive()) htx_app()

[Package HumanTranscriptomeCompendium version 1.1.2 Index]