# Fast treatment of MACSQuantify FACS data

## Documentation for package ‘MACSQuantifyR’ version 1.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

barplot_data | Generate barplots
combination_index | compute combination index
generate_report | Word report generation
load_MACSQuant | Load xls file from maxQuant 96-well-plate device
MACSQuant | The MACSQuant Class
MACSQuant-class | The MACSQuant Class
new_class_MQ | Create a new MACSQuant object
on_plate_selection | Sort experimental design on graphical 96-well-plate
pipeline | pipeline with report generation
rData | accessor function to access raw data
setPath | sets custom output path
sorted | accessor function to access sorted data