ModStringSet-io {Modstrings} | R Documentation

## Read/write an ModStringSet object from/to a file

### Description

Functions to read/write an ModStringSet object from/to a file.

### Usage

    readModDNAStringSet(filepath, format = "fasta", nrec = -1L,
      skip = 0L, seek.first.rec = FALSE, use.names = TRUE,
      with.qualities = FALSE)

    readModRNAStringSet(filepath, format = "fasta", nrec = -1L,
      skip = 0L, seek.first.rec = FALSE, use.names = TRUE,
      with.qualities = FALSE)

    writeModStringSet(x, filepath, append = FALSE, compress = FALSE,
      compression_level = NA, format = "fasta", ...)

### Arguments

`filepath, format, nrec, skip, seek.first.rec, use.names, with.qualities, append, compress, compression_level, ...` | See `XStringSet-io` for more details.
`x` | A `ModStringSet` object.

### Value

A `ModStringSet` of the defined type.

### Examples

    seqs <- paste0(paste(alphabet(ModDNAString()), collapse = ""),
                   c("A","G","T"))
    set <- ModDNAStringSet(seqs)
    file <- tempfile()
    writeModStringSet(set, file)
    read <- readModDNAStringSet(file)

[Package Modstrings version 1.2.1 Index]