match_matrix_dimensions {PrInCE} | R Documentation

## Match the dimensions of a query matrix to a profile matrix

### Description

Match the row and column names of a square feature matrix to the row names of a profile matrix, adding rows/columns containing `NA`s when proteins in the profile matrix are missing from the feature matrix.

### Usage

    match_matrix_dimensions(query, profile_matrix)

### Arguments

`query` | a square matrix containing features for pairs of proteins
`profile_matrix` | the profile matrix for which interactions are being predicted

### Value

a square matrix with the same row and column names as the input profile matrix, for use in interaction prediction

### Examples

    data(gold_standard)
    subset <- adjacency_matrix_from_list(gold_standard[seq(1, 200)])
    target <- adjacency_matrix_from_list(gold_standard)
    matched <- match_matrix_dimensions(subset, target)
    dim(subset)
    dim(target)
    dim(matched)

[Package PrInCE version 1.2.0 Index]