dSimer-package {dSimer} | R Documentation

## Integration of Disease Similarity Methods

### Description

dSimer is an R package which provides computation of nine methods for measuring disease-disease similarity, including a standard cosine similarity measure and eight function-based methods. The disease similarity matrix obtained from these nine methods can be visualized through heatmap and network. Biological data widely used in disease-disease associations study are also provided by dSimer.

### Details

Package: | dSimer
Type: | Package
Version: | 1.1.0
Date: | 12-10-2015
biocViews: | Software, Visualization, Network
Depends: | R (>= 3.3.0), igraph (>= 1.0.1)
Imports: | stats, Rcpp (>= 0.11.3), ggplot2, reshape2, GO.db, AnnotationDbi, org.Hs.eg.db, graphics
Suggests: | knitr, rmarkdown, BiocStyle
LinkingTo: | Rcpp
License: | GPL (>= 2)

### Author(s)

Min Li, Peng Ni

[Package dSimer version 1.12.0 Index]