projectFromNetworkRecombine,matrix-method {netSmooth} | R Documentation

## Combine gene expression from smoothed space (that of the network) with the expression of genes that were not smoothed (not present in network)

### Description

Combine gene expression from smoothed space (that of the network) with the expression of genes that were not smoothed (not present in network)

### Usage

    ## S4 method for signature 'matrix'
    projectFromNetworkRecombine(original_expression,
      smoothed_expression)

### Arguments

`original_expression` | the non-smoothed expression
`smoothed_expression` | the smoothed gene expression, in the space of the genes defined by the network
`filepath` | String: Path to location where hdf5 output file is supposed to be saved. Will be ignored when regular matrices or SummarizedExperiment are used as input.

### Value

a matrix in the dimensions of original_expression, where values that are present in smoothed_expression are copied from there.

[Package netSmooth version 1.6.0 Index]