DE {transcriptogramer} | R Documentation

## Get DE

### Description

Gets the content of the DE slot of an object of class Transcriptogram.

### Usage

    DE(object)

    ## S4 method for signature 'Transcriptogram'
    DE(object)

### Arguments

`object` | An object of class Transcriptogram.

### Value

This method returns the content of the DE slot of an object of class Transcriptogram.

### Author(s)

Diego Morais

### See Also

Hs900, association, transcriptogramPreprocess

### Examples

    transcriptogram <- transcriptogramPreprocess(association, Hs900, 50)
    ## Not run:
    transcriptogram <- transcriptogramStep1(transcriptogram, GSE9988, GPL570)
    transcriptogram <- transcriptogramStep2(transcriptogram)
    levels <- c(rep(FALSE, 3), rep(TRUE, 3))
    transcriptogram <- differentiallyExpressed(transcriptogram, levels, 0.01)
    DE(transcriptogram)

    ## End(Not run)

[Package transcriptogramer version 1.8.0 Index]