read.binding.site.list {DBChIP} | R Documentation

## read.binding.site.list

### Description

Process the list of binding sites into an internal format

### Usage

    read.binding.site.list(binding.site.list)

### Arguments

`binding.site.list` | a list of data.frames. Each data.frame corresponds to one condition in comparison and has three fields, chr, pos and weight, to indicate the binding location and strength.

### Details

The binding site for each condition is split into a list where binding sites are grouped according to their chromosomes.

### Value

A list of conditions, each of which is a list of binding sites in a certain chromosome. The binding sites are in data.frames with two fields, pos and weight, to indicate the binding location and strength.

### See Also

`DBChIP`

### Examples

    data("PHA4")
    bs.list <- read.binding.site.list(binding.site.list)
    str(bs.list)

[Package DBChIP version 1.32.0 Index]