Package: compartmap
Type: Package
Title: A/B compartment inference from ATAC-seq and methylation array
        data
Description: Compartmap performs shrunken A/B compartment inference from ATAC-seq and methylation arrays.
Version: 1.6.0
Date: 2018-10-28
Authors@R: c(person("Benjamin", "Johnson", role = c("aut", "cre"),
                    email = "ben.johnson@vai.org",),
             person("Tim", "Triche", role = c("aut")),
             person("Kasper", "Hansen", role = c("aut")),
             person("Jean-Philippe", "Fortin", role = c("aut")))
URL: https://github.com/biobenkj/compartmap
BugReports: https://github.com/biobenkj/compartmap/issues
Encoding: UTF-8
License: GPL-3 + file LICENSE
biocViews: ImmunoOncology, Genetics, Epigenetics, ATACSeq, MethylSeq,
        MethylationArray
Depends: R (>= 3.5.0), minfi, Homo.sapiens, mixOmics
Imports: SummarizedExperiment, GenomicRanges, gtools, parallel
Suggests: covr, testthat, knitr
RoxygenNote: 6.1.0
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/compartmap
git_branch: RELEASE_3_11
git_last_commit: 5a654c8
git_last_commit_date: 2020-04-27
Date/Publication: 2020-04-27
NeedsCompilation: no
Packaged: 2020-04-28 06:26:47 UTC; biocbuild
Author: Benjamin Johnson [aut, cre],
  Tim Triche [aut],
  Kasper Hansen [aut],
  Jean-Philippe Fortin [aut]
Maintainer: Benjamin Johnson <ben.johnson@vai.org>
Built: R 4.0.0; ; 2020-04-28 18:03:59 UTC; windows
