
export(geNetClassifier)
export(queryGeNetClassifier)
export(externalValidation.stats)
export(externalValidation.probMatrix)
export(querySummary)
export(calculateGenesRanking)

export(plotExpressionProfiles)
export(plotDiscriminantPower)
export(plotNetwork)
export(plotAssignments)

export(plot.GenesRanking)
export(plot.GeNetClassifierReturn)
export(plot.GenesNetwork)
S3method(plot, GenesRanking)
S3method(plot, GeNetClassifierReturn)
S3method(plot, GenesNetwork)

exportClasses(GenesRanking)
exportMethods(initialize, show, overview, getRanking, gClasses, numGenes, numSignificantGenes, getTopRanking, setProperties, genesDetails)

exportClasses(GenesNetwork)
exportMethods(initialize, show, overview, getSubNetwork, getNodes, getNumNodes, getEdges, getNumEdges, network2txt)

exportClasses(GeneralizationError)
exportMethods(initialize, show, overview)

exportClasses(GeNetClassifierReturn)
exportMethods(initialize, show, overview, names)

import(Biobase)
import(methods)
import(graphics)
import(grDevices)
importFrom(minet, minet)
importFrom(e1071, svm)
importFrom(graphics, plot)
importFrom(EBarrays,ebPatterns)
importFrom(EBarrays,emfit)
importFrom(EBarrays,postprob)




