ratdata2 {msgbsR} | R Documentation

## Read counts of correct MspI cut sites from a MS-GBS experiment of prostates from rats

### Description

A RangedSummarizedExperiment containing read counts generated from a MS-GBS experiment using the restriction enzyme MspI, focusing on chromosome 20 of Rat. The sites have been checked for the correct recognition site.

### Usage

    data(ratdata2)

### Format

RangedSummarizedExperiment

### Details

- ratdata2 A RangedSummarizedExperiment containing data for 13983 MspI cut sites on chromosome 20 in Rat and six samples (3 Control and 3 Experimental).

This dataset contains six prostate samples from rats: 3 control and 3 experimental high fat diet. The data can be used for differential methylation analyses.

### Value

RangedSummarizedExperiment

[Package msgbsR version 1.12.0 Index]