significantPathway-class {pathVar} | R Documentation

## Class `"significantPathway"`

### Description

This is a class representation for storing the output of the `sigPway` function in the one sample case.

### Objects from the Class

Objects are output by the function `sigPway` in the one sample case. Objects can be created by calls of the form `new("significantPathway", ...)`.

### Slots

`genesInSigPways1`:

  A `"list"` object that contains the genes per significant pathway belonging to the significant category.

`sigCatPerPway`:

  A `"list"` object that contains the category(ies) per pathway that are significant.

`thresPValue`:

  A `"numeric"` object that contains the chosen p-value for the significance.

### Methods

No methods defined with class "significantPathway" in the signature.

### Author(s)

Laurence de Torrente, Samuel Zimmerman, Jessica Mar

### Examples

    sig <- new("significantPathway",genesInSigPways1=list(),sigCatPerPway=list(),thresPValue=numeric())
    showClass("significantPathway")

[Package pathVar version 1.18.0 Index]