fluVaccine {qusage} | R Documentation

## Gene expression sets from Flu Vaccine trials

### Description

`fluVaccine` is a list containing data from two separate Flu Vaccine treatment studies, `GSE59635` and `GSE59654`. The top-level list contains two entries, `esets` and `phenoData`.

`fluVaccine$esets` is a list containing two expression matrices. Each matrix, which is labeled with the name of the GEO dataset it originates from, contains rows of gene expression levels and columns of samples.

`fluVaccine$phenoData` is a list containing two data frames. The rows of each data frame correspond to the columns in the expression matrices, and each data frame contains the following columns:

subjectID

  The subject ID

responder

  Factor describing the subject's response to flu vaccination, either "high" or "low".

bloodDrawDay

  The day post-vaccination that the sample was taken.

### Usage

      fluVaccine

### Format

`fluVaccine` is a list.

### Source

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE59635 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE59654

### References

Thakar J et al., Aging, 2015

[Package qusage version 2.22.0 Index]