TBPpwm {seqPattern} | R Documentation

## Position-weight matrix for TATA-box binding protein motif

### Description

This is a `matrix` object representing a position-weight matrix (PWM) for TATA-box binding protein motif. The scores in the matrix correspond to log2 ratio between probability of observing base b (rows) at position i (columns) and background probability of base b. This PWM has been derived using position frequency matrix from Jaspar database. It is intended to be used as an input data in running examples from `seqPattern` package help pages.

### Usage

    data(TBPpwm)

### Format

A `matrix` object

### Value

A `matrix` object

[Package seqPattern version 1.20.0 Index]