plotMarkerDensity {CytoTree} | R Documentation

## plotMarkerDensity

### Description

plotMarkerDensity

### Usage

    plotMarkerDensity(
      object,
      cutoff = -1,
      markers = NULL,
      adjust = 0.5,
      plot.theme = theme_bw()
    )

### Arguments

`object` | A CYT object
`cutoff` | numeric. Cutoff of trajectory value
`markers` | character. Markers used in the calculation progress
`adjust` | numeric. Transparency (0-1) of the dot, default is 1.
`plot.theme` | themes from `ggplot2`

### Value

ggplot2 figure

### Examples

    if (FALSE) {

    plotMarkerDensity(cyt)
    plotMarkerDensity(cyt, adjust = 1)

    }

[Package CytoTree version 1.0.3 Index]