htx_query_by_study_accession {HumanTranscriptomeCompendium} | R Documentation

## retrieve 'restfulSE' SummarizedExperiment instance for selected studies in htx compendium

### Description

retrieve 'restfulSE' SummarizedExperiment instance for selected studies in htx compendium

### Usage

    htx_query_by_study_accession(studies, htxSE, ...)

### Arguments

`studies` | character vector of study accessions
`htxSE` | SummarizedExperiment instance, typically the result of htx_load(), which we don't want to repeat needlessly
`...` | passed to 'htx_load', ignored if 'se' is nonmissing

### Value

SummarizedExperiment instance

### Note

This function was designed to perform a single query on a 'fresh' compendium image from 'htx_load()'. However, one could consider iterating the process to build up metadata on multiple series of studies. This is not likely to succeed without careful manipulation of the colData of the input SummarizedExperiment. A message will be written if the input SummarizedExperiment appears to be other than a 'fresh' 'htx_load' result.

### Examples

    htx_query_by_study_accession("ERP011411")

[Package HumanTranscriptomeCompendium version 1.6.0 Index]