get.regions.coverage {InPAS} | R Documentation

## claculate coverage for giving region

### Description

claculate coverage for giving region

### Usage

    get.regions.coverage(chr, utr3.regions.chr,
                                     hugeData, coverage, phmm=FALSE)

### Arguments

`chr` | chromosome
`utr3.regions.chr` | the GRanges of region to be extracted
`hugeData` | is it a huge dataset?
`coverage` | output of coverageFromBedGraph
`phmm` | prepare data for singleSample analysis?

### Value

GRanges with coverage data

### Author(s)

Jianhong Ou

[Package InPAS version 1.22.0 Index]