read_qza {MicrobiotaProcess} | R Documentation

## read the qza file, output of qiime2.

### Description

the function was designed to read the ouput of qiime2.

### Usage

    read_qza(qzafile, parallel = FALSE)

### Arguments

`qzafile` | character, the format of file should be one of 'BIOMV210DirFmt', 'TSVTaxonomyDirectoryFormat', 'NewickDirectoryFormat' and 'DNASequencesDirectoryFormat'.
`parallel` | logical, whether parsing the taxonomy by multi-parallel, efault is FALSE.

### Value

list contained one or multiple object of feature table, taxonomy table, tree and represent sequences.

### Examples

    otuqzafile <- system.file("extdata", "table.qza",
                              package="MicrobiotaProcess")
    otuqza <- read_qza(otuqzafile)
    str(otuqza)

[Package MicrobiotaProcess version 1.2.2 Index]