plot_mbs_contexts {MutationalPatterns} | R Documentation

## Plot the MBS contexts

### Description

Plot the MBS contexts

### Usage

    plot_mbs_contexts(counts, same_y = TRUE)

### Arguments

`counts` | A tibble containing the number of MBS per MBS length.
`same_y` | A boolean describing whether the same y axis should be used for all samples.

### Details

Plots the number of MBS per MBS length per sample. It takes a tibble with counts as its input. This tibble can be generated by count_mbs_contexts Each sample is plotted in a separate facet. The same y axis can be used for all samples or a separate y axis can be used.

### Value

A ggplot figure.

### See Also

`count_mbs_contexts`

Other MBS: `count_mbs_contexts()`, `plot_compare_mbs()`

### Examples

    ## Get The mbs counts
    ## See 'count_mbs_contexts()' for more info on how to do this.
    mbs_counts <- readRDS(system.file("states/blood_mbs_counts.rds",
      package = "MutationalPatterns"
    ))

    ## Plot contexts
    plot_mbs_contexts(mbs_counts)

    ## Use a different y axis for all samples.
    plot_mbs_contexts(mbs_counts, same_y = FALSE)

[Package MutationalPatterns version 3.0.1 Index]