get_clusters {STRINGdb} | R Documentation

## get_clusters

### Description

Returns a list of clusters of interacting proteins. See the iGraph (http://igraph.sourceforge.net/) documentation for additional information on the algorithms.

### Usage

    ## S4 method for signature 'STRINGdb'
    get_clusters(string_ids, algorithm="fastgreedy")

### Arguments

`string_ids` | a vector of STRING identifiers.
`algorithm` | algorithm to use for the clustering. You can choose between "fastgreedy", "walktrap", "spinglass" and "edge.betweenness").

### Value

list of clusters of interacting proteins.

### Author(s)

Andrea Franceschini

[Package STRINGdb version 2.2.2 Index]