seqCheck {SeqArray} | R Documentation

## Data Integrity Checking

### Description

Performs data integrity on a SeqArray GDS file.

### Usage

    seqCheck(gdsfile, verbose=TRUE)

### Arguments

`gdsfile` | a `SeqVarGDSClass` object, or a file name
`verbose` | if `TRUE`, display information

### Value

A list of the following components:

`hash` | a `data.frame` for hash checking, including `algo` for digest algorithms and `ok` for the checking states
`dimension` | a `data.frame` for checking the dimension of each variable, including `ok` for the checking states and `info` for the error messages

### Author(s)

Xiuwen Zheng

### Examples

    # the GDS file
    (gds.fn <- seqExampleFileName("gds"))

    seqCheck(gds.fn)

[Package SeqArray version 1.30.0 Index]