treeAndLeaf {TreeAndLeaf} | R Documentation

## Layout creation and plotting of the TreeAndLeaf in RedeR.

### Description

Creates tree-and-leaf layouts and plots. It also returns the given igraph with nodes coordinates added after setting of positions and relaxation by the force based algorithm implemented in the RedeR package.

### Usage

    treeAndLeaf(obj, gg)

### Arguments

`obj` | An object of RedPort class, from RedeR package <RedPort>.
`gg` | An igraph object generated by either `hclust2igraph` or `phylo2igraph`<igraph>.

### Value

Plotting of igraph in RedeR app and the given igraph with nodes coordinates added.

### See Also

`formatTree`

`addGraph`

`relax`

### Examples

    library(RedeR)
    rdp <- RedPort()
    hc <- hclust(dist(USArrests), "ave")
    gg <- hclust2igraph(hc)

    ## Not run:
    calld(rdp)
    treeAndLeaf(rdp, gg)

    ## End(Not run)

[Package TreeAndLeaf version 1.2.0 Index]