removeLowQualityProbes {beadarraySNP} | R Documentation

## Quality control of SnpSetIllumina objects

### Description

Remove probes form a SnpSetIllumina object that show a low quality throughout the experiment

### Usage

    removeLowQualityProbes(object, cutoff = 0.25)

### Arguments

`object` | SnpSetIllumina object
`cutoff` | numeric

### Details

Probes that have a median value below `cutoff` * median value for the whole experiment are deleted from the object.

### Value

SnpSetIllumina object

### Author(s)

Jan Oosting

[Package beadarraySNP version 1.56.0 Index]