getPPT {branchpointer} | R Documentation

## Get the best polypyramidine tract

### Description

Takes a query genomic sequence, finds all potential polypyramidine tracts (PPTs) between the test site and the annotated 3'exon. Returns the distance to the start of the longest PPT, and its length.

### Usage

    getPPT(attributes)

### Arguments

`attributes` | query attributes GenomicRanges

### Value

distance to the start of the longest PPT, and its length

### Author(s)

Beth Signal

[Package branchpointer version 1.16.0 Index]