GCT-class {cmapR} | R Documentation

## An S4 class to represent a GCT object

### Description

The GCT class serves to represent annotated matrices. The `mat` slot contains said data and the `rdesc` and `cdesc` slots contain data frames with annotations about the rows and columns, respectively

### Slots

`mat`

  a numeric matrix

`rid`

  a character vector of row ids

`cid`

  a character vector of column ids

`rdesc`

  a `data.frame` of row descriptors

`rdesc`

  a `data.frame` of column descriptors

`src`

  a character indicating the source (usually file path) of the data

### See Also

`parse_gctx`, `write_gctx`, `read_gctx_meta`, `read_gctx_ids`

visit http://clue.io/help for more information on the GCT format

[Package cmapR version 1.2.1 Index]