Codelink-class {codelink} | R Documentation

## Class Codelink

### Description

This is the storage class for Codelink data

### Objects from the Class

Object are created after reading text codelink files with readCodelink()

### Description

Codelink objects contain a single `"list"`, which contains the following elements:

sample

  Object of class `"character"` containing the sample names

file

  Object of class `"character"` containing the file names

name

  Object of class `"character"` containing the probe ID

method

  Object of class `"list"` containing log information

Smean

  Object of class `"matrix"` containing spot mean intensities

Bmedian

  Object of class `"matrix"` containing background median intensities

Ri

  Object of class `"matrix"` containing raw intensities

Ni

  Object of class `"matrix"` containing normalized intensities

snr

  Object of class `"matrix"` containing signal to noise ratio values

flag

  Object of class `"character"` containing assigned flags

### Note

More details are in the package vignette

### Author(s)

Diego Diez

### Examples

    ## Not run:
        data(codelink.example)

    ## End(Not run)

[Package codelink version 1.58.0 Index]