loops.small {diffloop} | R Documentation

## chr1:36000000-36300000 loops

### Description

A loops object containing unique 108 loops with 27 anchors for 6 samples and corresponding colData/rowData

### Usage

    loops.small

### Format

A small loops object

anchors

  GRanges object of anchor locations

loops

  indexes of interactions

samples

  Two replicates each of jurkat, naive, and primed cells

colData

  Groups identifying cell type and unnormalized sizeFactors

rowData

  Base initialization with only loopWidth values

...

### Value

A loops object

### Source

subsetRegion(loops,GRanges(c('1'),IRanges(c(36000000),c(36300000))))

[Package diffloop version 1.18.0 Index]