openCyto.options {openCyto} | R Documentation

## Some global options for openCyto See examples for the meaning of these options and how to get/set them.

### Description

Get/set some global options for openCyto

### Examples

    opt <- getOption("openCyto")
    #the threshold of minimum cell events required for the gating algorithm to proceed
    opt[["gating"]][["minEvents"]]
    #to change the threshold
    opt[["gating"]][["minEvents"]] <- 100
    options(openCyto = opt)

    #switch off the validity check flags(Not recommended)
    opt[["check.pop"]] <- FALSE
    options(openCyto = opt)

[Package openCyto version 2.2.0 Index]