pathwayPCA {pathwayPCA} | R Documentation

## Extract and Test the Significance of Pathway-Specific Principal Components

### Description

To introduce this package, please see our "Integrative Pathway Analysis" vignette: https://gabrielodom.github.io/pathwayPCA/articles//Introduction_to_pathwayPCA.html.

The `pathwayPCA` package has three main components:

- Import and Tidy Data: https://gabrielodom.github.io/pathwayPCA/articles/Supplement2-Importing_Data.html

- Create `Omics` Data Objects https://gabrielodom.github.io/pathwayPCA/articles/Supplement3-Create_Omics_Objects.html

- Test Pathway Significance https://gabrielodom.github.io/pathwayPCA/articles/Supplement4-Methods_Walkthrough.html

- Analyze and Visualize Results https://gabrielodom.github.io/pathwayPCA/articles/Supplement5-Analyse_Results.html

For an overview of these four topics in context, please see our Quickstart Guide: https://gabrielodom.github.io/pathwayPCA/articles/Supplement1-Quickstart_Guide.html

[Package pathwayPCA version 1.6.3 Index]