convertSCEToSeurat {singleCellTK} | R Documentation

## convertSCEToSeurat Converts sce object to seurat while retaining all assays and metadata

### Description

convertSCEToSeurat Converts sce object to seurat while retaining all assays and metadata

### Usage

    convertSCEToSeurat(
      inSCE,
      countsAssay = NULL,
      normAssay = NULL,
      scaledAssay = NULL
    )

### Arguments

`inSCE` | A `SingleCellExperiment` object to convert to a Seurat object.
`countsAssay` | Which assay to use from sce object for raw counts. Default `NULL`.
`normAssay` | Which assay to use from sce object for normalized data. Default `NULL`.
`scaledAssay` | Which assay to use from sce object for scaled data. Default `NULL`

### Value

Updated seurat object that contains all data from the input sce object

### Examples

    data(scExample, package = "singleCellTK")
    seurat <- convertSCEToSeurat(sce)

[Package singleCellTK version 2.0.0 Index]