singleCellTK {singleCellTK} | R Documentation

## Run the single cell analysis app

### Description

Use this function to run the single cell analysis app.

### Usage

    singleCellTK(inSCE = NULL, includeVersion = TRUE, theme = "yeti")

### Arguments

`inSCE` | Input SingleCellExperiment object.
`includeVersion` | Include the version number in the SCTK header. The default is TRUE.
`theme` | The bootswatch theme to use for the singleCellTK UI. The default is 'flatly'.

### Value

The shiny app will open

### Examples

    #Upload data through the app
    if(interactive()){
      singleCellTK()
    }

    # Load the app with a SingleCellExperiment object
    if(interactive()){
      data("mouseBrainSubsetSCE")
      singleCellTK(mouseBrainSubsetSCE)
    }

[Package singleCellTK version 2.0.0 Index]