scater_logNormCounts {singleCellTK} | R Documentation

## scater_logNormCounts Uses logNormCounts to log normalize input data

### Description

scater_logNormCounts Uses logNormCounts to log normalize input data

### Usage

    scater_logNormCounts(
      inSCE,
      logAssayName = "ScaterLogNormCounts",
      useAssay = "counts"
    )

### Arguments

`inSCE` | Input SingleCellExperiment object
`logAssayName` | New assay name for log normalized data
`useAssay` | Input assay

### Value

inSCE Updated SingleCellExperiment object that contains the new log normalized data

### Author(s)

Irzam Sarfraz

### Examples

    data(sce_chcl, package = "scds")
    sce_chcl <- scater_logNormCounts(sce_chcl,"logcounts", "counts")

[Package singleCellTK version 2.0.0 Index]