| adjacencyMatrix | Adjacency matrix |
| averageBetweennessCentrality | Network features |
| averageBetweennessEdgesCentrality | Network features |
| averageClosenessCentrality | Network features |
| averageClusteringCoefficient | Network features |
| averageDegreeCentrality | Network features |
| averageEigenvectorCentrality | Network features |
| averageShortestPath | Network features |
| betweennessCentrality | Node scores |
| betweennessCentralityTest | Network equality test |
| betweennessCentralityVertexTest | Node score equality test |
| betweennessEdgesCentrality | Node scores |
| centralityPathPlot | Structural measures of vertices view in metabolic pathways |
| closenessCentrality | Node scores |
| closenessCentralityTest | Network equality test |
| closenessCentralityVertexTest | Node score equality test |
| clusteringCoefficient | Node scores |
| clusteringCoefficientTest | Network equality test |
| clusteringCoefficientVertexTest | Node score equality test |
| degreeCentrality | Node scores |
| degreeCentralityTest | Network equality test |
| degreeCentralityVertexTest | Node score equality test |
| degreeDistributionTest | Network equality test |
| diffNetAnalysis | Differential network analysis method |
| doLabels | Class vector of data table |
| edgeBetweennessEdgeTest | Edge score equality test |
| edgeBetweennessTest | Network equality test |
| edgeTest | Edge score equality test |
| eigenvectorCentrality | Node scores |
| eigenvectorCentralityTest | Network equality test |
| eigenvectorCentralityVertexTest | Node score equality test |
| KLdegree | Kullback-Liebler divergence among the density functions of the degrees of two or more graphs |
| KLspectrum | Kullback-Liebler divergence among the spectral density functions of two or more graphs |
| labels | Labels of glioma tissues in gene expression |
| nDegreeDensities | Density functions of the degrees of n graphs |
| networkFeature | Network features |
| networkTest | Network equality test |
| nodeScores | Node scores |
| nodeTest | Node score equality test |
| nSpectralDensities | Spectral Density functions of n graphs |
| pathPlot | Variable values view in metabolic pathways |
| readSetFile | Read a collection of variables sets (*.txt) |
| readVarFile | Read variable values matrix |
| runBioNetStat | Run BNS |
| spectralDistributionTest | Network equality test |
| spectralEntropies | Network features |
| spectralEntropyTest | Network equality test |
| varFile | Gene expression in glioma tissues |