| adjacencyMatrix | Performs Netwrok Construction step In SGCP Pipeline |
| cheng | Normalized gene expression Of ischemic cardiomyopathy (ICM) from a publication by Cheng et al. |
| clustering | Perform Network Clustering step In SGCP Pipeline |
| ezSGCP | Performs All SGCP pipeline In One Step |
| geneOntology | Performs Gene Ontology Enrichment step In SGCP Pipeline |
| resClus | An example of output of 'clustering' function in SGCP pipeline. |
| resFinalGO | An example of output of 'geneOntololgy' function in SGCP pipeline. |
| resInitialGO | An example of output of 'geneOntololgy' function in SGCP pipeline. |
| resSemiLabel | An example of output of 'semiLabeling' function in SGCP pipeline. |
| resSemiSupervised | An example of output of 'semiSupervised' function in SGCP pipeline. |
| semiLabeling | Performs Gene Semi-labeling step In SGCP Pipeline |
| semiSupervised | Performs Semi-supervised step In SGCP Pipeline |
| sgcp | An example of output of 'zSGCP' function in SGCP pipeline. |
| SGCP_ezPLOT | Performs All SGCP Plots In One Step |
| SGCP_plot_bar | Mean Over Gene Ontology Enrichment p-values In SGCP Pipeline |
| SGCP_plot_conductance | Plots Cluster Conductance Index In SGCP Pipeline |
| SGCP_plot_density | Density Plot Of Gene Ontology Enrichment p-values In SGCP Pipeline |
| SGCP_plot_heatMap | Plots Adjacency Matrix HeatMap In SGCP Pipeline |
| SGCP_plot_jitter | Jitter Plot Of Gene Ontology Enrichment p-values In SGCP Pipeline |
| SGCP_plot_pca | Plots PCA Of The Data In SGCP Pipeline |
| SGCP_plot_pie | Pie Chart of Gene Ontology Terms In SGCP Pipeline |
| SGCP_plot_silhouette | Plots Gene Silhouette Index In SGCP Pipeline |