MGnifyR-package	MGnifyR-package
authTok	MgnifyClient-accessors
authTok,MgnifyClient-method	MgnifyClient-accessors
authTok<-	MgnifyClient-accessors
authTok<-,MgnifyClient-method	MgnifyClient-accessors
cacheDir	MgnifyClient-accessors
cacheDir,MgnifyClient-method	MgnifyClient-accessors
cacheDir<-	MgnifyClient-accessors
cacheDir<-,MgnifyClient-method	MgnifyClient-accessors
clearCache	MgnifyClient-accessors
clearCache,MgnifyClient-method	MgnifyClient-accessors
clearCache<-	MgnifyClient-accessors
clearCache<-,MgnifyClient-method	MgnifyClient-accessors
databaseUrl	MgnifyClient-accessors
databaseUrl,MgnifyClient-method	MgnifyClient-accessors
databaseUrl<-	MgnifyClient-accessors
databaseUrl<-,MgnifyClient-method	MgnifyClient-accessors
deprecate	deprecate
doQuery	doQuery
doQuery,MgnifyClient-method	doQuery
getData	getData
getData,MgnifyClient-method	getData
getFile	getFile
getFile,MgnifyClient-method	getFile
getMetadata	getMetadata
getMetadata,MgnifyClient-method	getMetadata
getResult	getResult
getResult,MgnifyClient-method	getResult
MgnifyClient	MgnifyClient
MgnifyClient-accessors	MgnifyClient-accessors
MgnifyClient-class	MgnifyClient
MGnifyR	MGnifyR-package
mgnify_analyses_from_samples	deprecate
mgnify_analyses_from_studies	deprecate
mgnify_client	deprecate
mgnify_download	deprecate
mgnify_get_analyses_metadata	deprecate
mgnify_get_analyses_phyloseq	deprecate
mgnify_get_analyses_results	deprecate
mgnify_get_download_urls	deprecate
mgnify_query	deprecate
mgnify_retrieve_json	deprecate
searchAnalysis	searchAnalysis
searchAnalysis,MgnifyClient-method	searchAnalysis
searchFile	getFile
searchFile,MgnifyClient-method	getFile
showWarnings	MgnifyClient-accessors
showWarnings,MgnifyClient-method	MgnifyClient-accessors
showWarnings<-	MgnifyClient-accessors
showWarnings<-,MgnifyClient-method	MgnifyClient-accessors
useCache	MgnifyClient-accessors
useCache,MgnifyClient-method	MgnifyClient-accessors
useCache<-	MgnifyClient-accessors
useCache<-,MgnifyClient-method	MgnifyClient-accessors
verbose	MgnifyClient-accessors
verbose,MgnifyClient-method	MgnifyClient-accessors
verbose<-	MgnifyClient-accessors
verbose<-,MgnifyClient-method	MgnifyClient-accessors
