| advChar | adverSCarial class |
| advChar-class | adverSCarial class |
| advGridMinChange | Grid search of min change adversarial attack. Tries each combination on a cluster, given a list of genes and a list of modifications. |
| advList | adverSCarial class |
| advList-class | adverSCarial class |
| advMaxChange | Find a max change adversarial attack. It finds the longer list of genes you can modify on a cluster without changing its classification. |
| advModifications | Returns a modified RNA expression DelayedMatrix, or a modified SingleCellExperiment, for a given cluster, for a given modification. |
| advRandWalkMinChange | Random walk search of min change adversarial attack. |
| advSingleGene | Find a one gene min change adversarial attack list. A one gene min change adversarial attack refers to the modification of a single gene within a cluster, leading to a change in its classification. The function returns a list of genes/new classification. |
| matrixFromSCE | Returns the RNA expression matrix from a SingleCellExperiment with unique hgnc gene names in columns |
| maxChangeOverview | Gives an overview of the susceptibility to max change attacks, for each cell type, for a given list of modifications. |
| MClassifier | Example cell type classifier for pbmc clustered datasets. |
| predictWithNewValue | Returns a classification and an odd value from a RNA expression DelayedMatrix or a SingleCellExperiment object, for given genes, for a given cluster, for a given modification. |
| sceConvertToHGNC | Returns a SingleCellExperiment object keeping unique HGNC gene |
| singleGeneOverview | Gives an overview of the susceptibility to single gene attacks, for each cell type, for a given list of modifications. |