Package: chipseqDB
Version: 0.99.114950
Depends: R (>= 3.2.3)
Imports: BiocStyle, knitr, Rsubread, Rsamtools, rtracklayer, csaw,
        statmod, locfit, edgeR, org.Mm.eg.db,
        TxDb.Mmusculus.UCSC.mm10.knownGene, ChIPpeakAnno, Gviz
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: e39729b3a9780bf617fadfdc3eb2c6fb
NeedsCompilation: no

Package: eQTL
Version: 0.99.113341
Depends: R (>= 3.2.3)
Imports: knitcitations, bibtex, GenomeInfoDb, S4Vectors, GGtools,
        GGdata, yri1kgv, snpStats, scatterplot3d, lumi, parallel,
        foreach, doParallel, biglm, lumiHumanAll.db, rmeta,
        SNPlocs.Hsapiens.dbSNP144.GRCh37, reshape2, ggplot2
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: c3915dd161106edc6106491924b27ac6
NeedsCompilation: no

Package: liftOver
Version: 0.99.108006
Depends: R (>= 3.2.3)
Imports: gwascat, rtracklayer
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: b3c103cb0c5573c6e3aa47eca6db2179
NeedsCompilation: no

Package: rnaseqGene
Version: 0.99.116770
Depends: R (>= 3.2.3)
Imports: BiocStyle, knitr, rmarkdown, airway, Rsamtools,
        GenomicFeatures, GenomicAlignments, BiocParallel, DESeq2,
        pheatmap, RColorBrewer, PoiClaClu, ggplot2, genefilter,
        AnnotationDbi, org.Hs.eg.db, Gviz, sva, fission
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: 3d6e849a1adac84d0b5a0d050f6b7dc3
NeedsCompilation: no

Package: sequencing
Version: 0.99.106465
Depends: R (>= 3.2.3)
Imports: GenomicRanges, GenomicAlignments, Biostrings, Rsamtools,
        ShortRead, BiocParallel, rtracklayer, VariantAnnotation,
        AnnotationHub, BSgenome.Hsapiens.UCSC.hg19,
        RNAseqData.HNRNPC.bam.chr14
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: 973ce7857f37d287c8304a901bae9387
NeedsCompilation: no

Package: variants
Version: 0.99.110069
Depends: R (>= 3.2.3)
Imports: VariantAnnotation, cgdv17, org.Hs.eg.db,
        TxDb.Hsapiens.UCSC.hg19.knownGene, BSgenome.Hsapiens.UCSC.hg19,
        PolyPhen.Hsapiens.dbSNP131, ensemblVEP
Suggests: knitr, knitcitations
License: Artistic-2.0
MD5sum: 80a94ff3613ace206bbe0509fd47d8da
NeedsCompilation: no