Package: ExpressionNormalizationWorkflow
Type: Package
Title: Gene Expression Normalization Workflow
Version: 1.1.1
Published: 2014-04-30
Authors@R: as.person(c(
    "Karthikeyan Murugesan<karthikeyanm60@yahoo.com> [aut, cre]",
    "Greg Gibson<ggibson.gt@gmail.com> [sad, ths]"
    ))
Description: An extensive, customized expression normalization workflow
    incorporating Supervised Normalization of Microarryas(SNM), Surrogate Variable
    Analysis(SVA) and Principal Variance Component Analysis to identify batch
    effects and remove them from the expression data to enhance the ability to
    detect the underlying biological signals.
Imports: Biobase (>= 2.24.0), limma (>= 3.20.9), lme4 (>= 1.1.7),
        matrixStats (>= 0.10.3), pvca (>= 1.4.0), snm (>= 1.12.0), sva
        (>= 3.10.0), vsn (>= 3.32.0)
VignetteBuilder: knitr
Suggests: knitr
License: GPL (>=3)
Encoding: UTF-8
LazyData: true
BugReports: https://github.com/
RoxygenNote: 5.0.1.9000
NeedsCompilation: no
Packaged: 2016-09-14 09:19:34 UTC; jenkins
Author: Karthikeyan Murugesan [aut, cre],
  Greg Gibson [ths]
Maintainer: Karthikeyan Murugesan <karthikeyanm60@yahoo.com>
