CHANGES IN VERSION 2.8.5
------------------------

    o Major migration from ExpressionSet to SummarizedExperiment


CHANGES IN VERSION 2.8.0
------------------------

    o Major migration from ExpressionSet to SummarizedExperiment

CHANGES IN VERSION 2.4.1
------------------------

    o Adding a min.cpm filter for RNA-seq data to de.ana

CHANGES IN VERSION 2.3.2
------------------------

    o Additional sbea methods: gsa, mgsa, padog, globaltest, roast, camera, gsva
    o Additional nbea methods: netgsa, degraph, topologygsa, ganpa, cepa 

CHANGES IN VERSION 2.1.15
-------------------------

    o Slight modification on ORA's hypergeometric p-value calculation according to 
      http://mengnote.blogspot.de/2012/12/calculate-correct-hypergeometric-p.html 

CHANGES IN VERSION 2.1.14
-------------------------

    o Adapting GGEA to also deal with 2-column GRNs

CHANGES IN VERSION 2.1.12
-------------------------

    o Adapting SPIA to deal with non-kegg gene sets

CHANGES IN VERSION 2.1.10
-------------------------

    o Including EmpiricalBrownsMethod (ebm) among sbea methods

CHANGES IN VERSION 1.99.6
-------------------------

    o adaption of specific local statistics for RNA-seq data 
        for sample-permutation methods GSEA, SAFE, and SAMGS

CHANGES IN VERSION 1.99.5
-------------------------

    o Including PathNet among nbea methods

CHANGES IN VERSION 1.99.3
-------------------------

    o GSEA permutation approximation based on npGSEA
    o extended combination functionality

CHANGES IN VERSION 1.99.1
-------------------------

    o major overhaul of the look'n'feel based on ReportingTools
    o interactive graphics using imageMap
    o reworked set and graph view
    o new kegg view based on pathview

CHANGES IN VERSION 1.1.3
------------------------

    o de.ana: extensions for RNA-seq now includes DESeq and edgeR
    o get.go.genesets: new getter for GO genesets

CHANGES IN VERSION 1.1.1
------------------------

    o de.ana: now based on limma functionality 
    o ggea.graph: extended control of layout
    o ggea: 
        * permutation p-value now based on fast edge resampling
        * p-value approximation now based on gaussian mixture
        * extended control for edge selection (consistency threshold, edge type, ...)
    
CHANGES IN VERSION 1.0.0
------------------------

    o EnrichmentBrowser 1.0.0: Initial release of the 'EnrichmentBrowser' package
