# Detecting hidden batch factors through data adaptive adjustment for biological effects

## Documentation for package ‘DASC’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

DASC-package | Detecting hidden batch factors through data adaptive shrinkage and clustering (DASC)
adj2vector | Transform the adjacency matrix to a vector
DASC | Detecting hidden batch factors through data adaptive shrinkage and clustering (DASC)
get_father | Representing node in this subtype
Ini_SemiNMF | Initialization of the semi-NMF
Loss_Fro | Get the error of Semi-NMF using frobenius norm
merge | Combine two trees into one
Semi_NMF | Main function of semi-NMF
Sptree | Get Spanning tree from adjacency matrix
stanfordData | Stanford RNA-Seq dataset
trans_ADJ | Outputs Adjacency matrix from the factor vector
trans_Laplace | Get Laplace matrix from factor vector
update_G | Update G in Semi-NMF