DEXSeqResults-class {DEXSeq} | R Documentation

## DEXSeqResults object

### Description

The `DEXSeqResults` object is a subclass of a `DataFrame`. It collects relevant information from a `DEXSeqDataSet` object with the results generated from testing for differences in exon usage.

### Usage

      DEXSeqResults( object, independentFiltering=TRUE, filter)

### Arguments

`object` | A `DEXSeqDataSet` object.
`independentFiltering` | Logical indicating whether independent filtering should be applied automatically.
`filter` | A vector of filter statistics over which the independent filtering will be optimized. The default is the normalized exon means.

### Value

A DEXSeqResults object.

### Examples

      data(pasillaDEXSeqDataSet, package="pasilla")
      dxd <- estimateSizeFactors( dxd )
      dxd <- estimateDispersions( dxd )
      dxd <- testForDEU( dxd )
      dxr <- DEXSeqResults( dxd )

[Package DEXSeq version 1.24.4 Index]