# Gene Selection

## Documentation for package ‘DFP’ version 1.36.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

DFP-package | DFP Package Overview
calculateDiscriminantFuzzyPattern | Calculates the Discriminant Fuzzy Pattern to select significative genes
calculateFuzzyPatterns | Calculates a Fuzzy Pattern for each category of the samples
calculateMembershipFunctions | Calculates Membership Functions
computeMembership-method | Class "HighExpressionLevel"
computeMembership-method | Class "LowExpressionLevel"
computeMembership-method | Class "MediumExpressionLevel"
DFP | DFP Package Overview
discretizeExpressionValues | Function to discretize gene expression data
discriminantFuzzyPattern | Discriminant Fuzzy Pattern to filter genes
ExpressionLevel-class | Class "ExpressionLevel"
HighExpressionLevel-class | Class "HighExpressionLevel"
LowExpressionLevel-class | Class "LowExpressionLevel"
MediumExpressionLevel-class | Class "MediumExpressionLevel"
plotDiscriminantFuzzyPattern | Plots the Discriminant Fuzzy Pattern of the relevant genes
plotMembershipFunctions | Plots the Membership Functions (Low, Medium, High) used to discretize gene expression values
readCSV | Creates an ExpressionSet with an AnnotatedDataFrame from CSV files
rmadataset | A sample ExpressionSet object
setValues-method | Class "HighExpressionLevel"
setValues-method | Class "LowExpressionLevel"
setValues-method | Class "MediumExpressionLevel"
show-method | Class "ExpressionLevel"
show-methods | Prints the slots (attributes) of an ExpressionLevel object
showDiscreteValues | Prints the labels to which the algorithm converts the gene expression values
showFuzzyPatterns | Plots the Fuzzy Patterns corresponding to a class